#------------------------------------------------------------------------------ #$Date: 2012-02-28 14:14:52 +0200 (Tue, 28 Feb 2012) $ #$Revision: 35911 $ #$URL: file:///home/coder/svn-repositories/cod/cif/8/10/25/8102522.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_8102522 loop_ _publ_author_name 'Ling Jiang' 'Ji-Wu Wang' 'Yi-Xia Ren' 'Ji-Jiang Wang' 'Xiang-Yang Hou' _publ_section_title ; Crystal structure of tetraaqua-[6-(5-carboxypyridin-2-yl)nicotinato]nickel(II), Ni(H2O)4(C12H6N2O4) ; _journal_issue 4 _journal_name_full 'Zeitschrift f\"ur Kristallographie - New Crystal Structures' _journal_page_first 567 _journal_volume 224 _journal_year 2009 _chemical_formula_sum 'C12 H14 N2 Ni O8' _chemical_formula_weight 372.96 _chemical_name_systematic ; (6-(5-carboxypyridin-2-yl)nicotinic) nickel(II) tetrahydrate, C~12~H~14~N~2~NiO~8~ ; _space_group_IT_number 2 _symmetry_cell_setting triclinic _symmetry_space_group_name_Hall '-P 1' _symmetry_space_group_name_H-M 'P -1' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 98.891(3) _cell_angle_beta 104.402(3) _cell_angle_gamma 97.690(3) _cell_formula_units_Z 2 _cell_length_a 6.9916(19) _cell_length_b 10.186(3) _cell_length_c 10.493(3) _cell_measurement_reflns_used 3751 _cell_measurement_temperature 295(2) _cell_measurement_theta_max 28.17 _cell_measurement_theta_min 2.60 _cell_volume 703.4(3) _computing_cell_refinement 'Bruker SMART' _computing_data_collection 'Bruker SMART' _computing_data_reduction 'Bruker SAINT' _computing_molecular_graphics 'Bruker SHELXTL' _computing_publication_material 'Bruker SHELXTL' _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 (Sheldrick, 1990)' _diffrn_ambient_temperature 295(2) _diffrn_measured_fraction_theta_full 0.992 _diffrn_measured_fraction_theta_max 0.992 _diffrn_measurement_device_type 'CCD area detector' _diffrn_measurement_method 'phi and omega scans' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0142 _diffrn_reflns_av_sigmaI/netI 0.0196 _diffrn_reflns_limit_h_max 8 _diffrn_reflns_limit_h_min -8 _diffrn_reflns_limit_k_max 12 _diffrn_reflns_limit_k_min -12 _diffrn_reflns_limit_l_max 12 _diffrn_reflns_limit_l_min -12 _diffrn_reflns_number 5253 _diffrn_reflns_theta_full 25.50 _diffrn_reflns_theta_max 25.50 _diffrn_reflns_theta_min 2.60 _diffrn_standards_number 0 _exptl_absorpt_coefficient_mu 1.426 _exptl_absorpt_correction_T_max 0.8812 _exptl_absorpt_correction_T_min 0.6183 _exptl_absorpt_correction_type multi-scan _exptl_absorpt_process_details sadabs _exptl_crystal_colour blue _exptl_crystal_density_diffrn 1.761 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 384 _exptl_crystal_size_max 0.37 _exptl_crystal_size_mid 0.28 _exptl_crystal_size_min 0.09 _refine_diff_density_max 0.318 _refine_diff_density_min -0.210 _refine_diff_density_rms 0.051 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.066 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 208 _refine_ls_number_reflns 2601 _refine_ls_number_restraints 0 _refine_ls_restrained_S_all 1.066 _refine_ls_R_factor_all 0.0246 _refine_ls_R_factor_gt 0.0229 _refine_ls_shift/su_max 0.001 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0355P)^2^+0.2828P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.0630 _refine_ls_wR_factor_ref 0.0640 _reflns_number_gt 2446 _reflns_number_total 2601 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file 1267-2723.cff _[local]_cod_data_source_block a _[local]_cod_cif_authors_sg_H-M P-1 _cod_depositor_comments ; The following automatic conversions were performed: '_symmetry_cell_setting' value 'Triclinic' changed to 'triclinic' according to '/home/saulius/struct/CIF-dictionaries/cif_core.dic' dictionary named 'cif_core.dic' version 2.4.1 from 2010-06-29. Automatic conversion script Id: cif_fix_enum 1555 2011-01-17 13:19:09Z saulius ; _cod_database_code 8102522 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-x, -y, -z' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group Ni1 Ni 0.67225(3) 0.80927(2) 0.78674(2) 0.02139(9) Uani 1 1 d . . . O1 O 0.7549(2) 0.40882(13) 1.10698(14) 0.0367(3) Uani 1 1 d . . . O2 O 0.7330(2) 0.21199(13) 0.97308(13) 0.0308(3) Uani 1 1 d . . . O3 O 0.7655(2) 1.01992(14) 0.34304(15) 0.0397(4) Uani 1 1 d . . . O4 O 0.8930(2) 0.87591(16) 0.21870(14) 0.0402(4) Uani 1 1 d . . . N1 N 0.7135(2) 0.61123(15) 0.78782(15) 0.0232(3) Uani 1 1 d . . . N2 N 0.7148(2) 0.75718(15) 0.59979(15) 0.0234(3) Uani 1 1 d . . . C1 C 0.7181(3) 0.54429(18) 0.88852(18) 0.0250(4) Uani 1 1 d . . . H1 H 0.7046 0.5898 0.9689 0.030 Uiso 1 1 calc R . . C2 C 0.7421(3) 0.40963(18) 0.87875(18) 0.0240(4) Uani 1 1 d . . . C3 C 0.7585(3) 0.34238(18) 0.75743(19) 0.0280(4) Uani 1 1 d . . . H3 H 0.7731 0.2522 0.7468 0.034 Uiso 1 1 calc R . . C4 C 0.7532(3) 0.41030(18) 0.65228(19) 0.0272(4) Uani 1 1 d . . . H4 H 0.7627 0.3659 0.5703 0.033 Uiso 1 1 calc R . . C5 C 0.7334(3) 0.54506(17) 0.67050(17) 0.0221(4) Uani 1 1 d . . . C6 C 0.7363(3) 0.84192(18) 0.51667(18) 0.0260(4) Uani 1 1 d . . . H6 H 0.7198 0.9306 0.5406 0.031 Uiso 1 1 calc R . . C7 C 0.7820(3) 0.80367(18) 0.39638(17) 0.0249(4) Uani 1 1 d . . . C8 C 0.7963(3) 0.66934(19) 0.35853(18) 0.0277(4) Uani 1 1 d . . . H8 H 0.8200 0.6390 0.2766 0.033 Uiso 1 1 calc R . . C9 C 0.7749(3) 0.58078(19) 0.44424(18) 0.0280(4) Uani 1 1 d . . . H9 H 0.7842 0.4905 0.4203 0.034 Uiso 1 1 calc R . . C10 C 0.7395(3) 0.62819(17) 0.56591(17) 0.0223(4) Uani 1 1 d . . . C11 C 0.7450(3) 0.34002(18) 0.99642(19) 0.0252(4) Uani 1 1 d . . . C12 C 0.8162(3) 0.9080(2) 0.31208(19) 0.0287(4) Uani 1 1 d . . . O5 O 0.6348(2) 1.00048(13) 0.75468(13) 0.0301(3) Uani 1 1 d . . . H1W H 0.5162 0.9997 0.7184 0.045 Uiso 1 1 d R . . H2W H 0.6803 1.0626 0.8198 0.045 Uiso 1 1 d R . . O6 O 0.35503(19) 0.74280(13) 0.71789(13) 0.0282(3) Uani 1 1 d . . . H3W H 0.3187 0.6975 0.7686 0.042 Uiso 1 1 d R . . H4W H 0.2914 0.8016 0.7006 0.042 Uiso 1 1 d R . . O7 O 0.6345(2) 0.85829(16) 0.97410(13) 0.0386(4) Uani 1 1 d . . . H5W H 0.5160 0.8358 0.9708 0.058 Uiso 1 1 d R . . H6W H 0.7166 0.8600 1.0431 0.058 Uiso 1 1 d R . . O8 O 0.9719(2) 0.88658(15) 0.86236(15) 0.0406(4) Uani 1 1 d . . . H7W H 1.0003 0.9517 0.8290 0.061 Uiso 1 1 d R . . H8W H 1.0617 0.8553 0.9019 0.061 Uiso 1 1 d R . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 Ni1 0.03049(14) 0.01703(13) 0.01902(13) 0.00582(9) 0.00915(10) 0.00534(9) O1 0.0606(10) 0.0248(7) 0.0282(7) 0.0083(6) 0.0173(7) 0.0060(6) O2 0.0456(8) 0.0194(7) 0.0313(7) 0.0106(5) 0.0130(6) 0.0083(6) O3 0.0485(9) 0.0329(8) 0.0480(9) 0.0234(7) 0.0188(7) 0.0145(7) O4 0.0479(9) 0.0523(9) 0.0328(8) 0.0229(7) 0.0212(7) 0.0162(7) N1 0.0312(8) 0.0188(7) 0.0232(8) 0.0076(6) 0.0111(6) 0.0059(6) N2 0.0324(8) 0.0186(7) 0.0220(7) 0.0066(6) 0.0102(6) 0.0063(6) C1 0.0329(10) 0.0230(9) 0.0230(9) 0.0085(7) 0.0112(8) 0.0070(7) C2 0.0262(9) 0.0214(9) 0.0272(9) 0.0108(7) 0.0090(7) 0.0040(7) C3 0.0361(10) 0.0189(9) 0.0345(10) 0.0102(8) 0.0154(8) 0.0076(8) C4 0.0370(10) 0.0219(9) 0.0272(9) 0.0062(7) 0.0147(8) 0.0084(8) C5 0.0246(9) 0.0206(9) 0.0231(9) 0.0073(7) 0.0082(7) 0.0040(7) C6 0.0356(10) 0.0213(9) 0.0241(9) 0.0080(7) 0.0104(8) 0.0070(8) C7 0.0267(9) 0.0278(10) 0.0230(9) 0.0108(7) 0.0082(7) 0.0059(7) C8 0.0350(10) 0.0308(10) 0.0208(9) 0.0061(8) 0.0115(8) 0.0090(8) C9 0.0391(11) 0.0215(9) 0.0258(9) 0.0048(7) 0.0119(8) 0.0084(8) C10 0.0249(9) 0.0201(9) 0.0228(9) 0.0062(7) 0.0070(7) 0.0042(7) C11 0.0261(9) 0.0226(9) 0.0304(10) 0.0119(8) 0.0092(8) 0.0050(7) C12 0.0258(9) 0.0369(11) 0.0258(10) 0.0160(8) 0.0056(8) 0.0058(8) O5 0.0402(8) 0.0198(6) 0.0307(7) 0.0044(5) 0.0094(6) 0.0076(6) O6 0.0366(7) 0.0222(6) 0.0282(7) 0.0092(5) 0.0102(6) 0.0064(5) O7 0.0352(8) 0.0554(10) 0.0216(7) 0.0014(6) 0.0098(6) -0.0006(7) O8 0.0320(8) 0.0394(8) 0.0495(9) 0.0272(7) 0.0015(7) 0.0001(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Ni Ni 0.3393 1.1124 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag O7 Ni1 O8 89.79(6) . . ? O7 Ni1 N2 178.69(6) . . ? O8 Ni1 N2 89.55(6) . . ? O7 Ni1 O5 89.91(6) . . ? O8 Ni1 O5 86.90(6) . . ? N2 Ni1 O5 91.18(6) . . ? O7 Ni1 N1 99.21(6) . . ? O8 Ni1 N1 93.48(6) . . ? N2 Ni1 N1 79.70(6) . . ? O5 Ni1 N1 170.87(5) . . ? O7 Ni1 O6 86.71(5) . . ? O8 Ni1 O6 175.25(6) . . ? N2 Ni1 O6 94.01(6) . . ? O5 Ni1 O6 89.88(5) . . ? N1 Ni1 O6 90.26(6) . . ? C1 N1 C5 118.49(15) . . ? C1 N1 Ni1 127.32(12) . . ? C5 N1 Ni1 114.18(11) . . ? C6 N2 C10 118.74(15) . . ? C6 N2 Ni1 125.59(12) . . ? C10 N2 Ni1 115.41(11) . . ? N1 C1 C2 123.21(16) . . ? N1 C1 H1 118.4 . . ? C2 C1 H1 118.4 . . ? C3 C2 C1 117.73(16) . . ? C3 C2 C11 121.85(16) . . ? C1 C2 C11 120.41(16) . . ? C4 C3 C2 119.64(17) . . ? C4 C3 H3 120.2 . . ? C2 C3 H3 120.2 . . ? C3 C4 C5 119.34(17) . . ? C3 C4 H4 120.3 . . ? C5 C4 H4 120.3 . . ? N1 C5 C4 121.57(16) . . ? N1 C5 C10 115.51(15) . . ? C4 C5 C10 122.89(16) . . ? N2 C6 C7 123.12(17) . . ? N2 C6 H6 118.4 . . ? C7 C6 H6 118.4 . . ? C8 C7 C6 117.89(16) . . ? C8 C7 C12 122.32(17) . . ? C6 C7 C12 119.78(17) . . ? C9 C8 C7 119.33(17) . . ? C9 C8 H8 120.3 . . ? C7 C8 H8 120.3 . . ? C10 C9 C8 119.35(17) . . ? C10 C9 H9 120.3 . . ? C8 C9 H9 120.3 . . ? N2 C10 C9 121.38(16) . . ? N2 C10 C5 115.01(15) . . ? C9 C10 C5 123.57(16) . . ? O1 C11 O2 124.44(17) . . ? O1 C11 C2 118.94(16) . . ? O2 C11 C2 116.61(16) . . ? O4 C12 O3 125.76(18) . . ? O4 C12 C7 117.48(17) . . ? O3 C12 C7 116.76(17) . . ? Ni1 O5 H1W 109.5 . . ? Ni1 O5 H2W 116.5 . . ? H1W O5 H2W 111.8 . . ? Ni1 O6 H3W 109.5 . . ? Ni1 O6 H4W 114.6 . . ? H3W O6 H4W 115.2 . . ? Ni1 O7 H5W 109.5 . . ? Ni1 O7 H6W 125.5 . . ? H5W O7 H6W 117.7 . . ? Ni1 O8 H7W 109.5 . . ? Ni1 O8 H8W 131.0 . . ? H7W O8 H8W 117.8 . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag Ni1 O7 2.0430(14) . ? Ni1 O8 2.0435(15) . ? Ni1 N2 2.0564(15) . ? Ni1 O5 2.0664(14) . ? Ni1 N1 2.0767(16) . ? Ni1 O6 2.1329(14) . ? O1 C11 1.240(2) . ? O2 C11 1.276(2) . ? O3 C12 1.258(2) . ? O4 C12 1.251(2) . ? N1 C1 1.340(2) . ? N1 C5 1.358(2) . ? N2 C6 1.339(2) . ? N2 C10 1.352(2) . ? C1 C2 1.395(3) . ? C1 H1 0.9300 . ? C2 C3 1.388(3) . ? C2 C11 1.513(2) . ? C3 C4 1.386(3) . ? C3 H3 0.9300 . ? C4 C5 1.386(3) . ? C4 H4 0.9300 . ? C5 C10 1.491(2) . ? C6 C7 1.389(3) . ? C6 H6 0.9300 . ? C7 C8 1.389(3) . ? C7 C12 1.516(2) . ? C8 C9 1.388(3) . ? C8 H8 0.9300 . ? C9 C10 1.387(3) . ? C9 H9 0.9300 . ? O5 H1W 0.8200 . ? O5 H2W 0.8205 . ? O6 H3W 0.8200 . ? O6 H4W 0.8090 . ? O7 H5W 0.8200 . ? O7 H6W 0.8007 . ? O8 H7W 0.8200 . ? O8 H8W 0.7954 . ? loop_ _geom_hbond_atom_site_label_D _geom_hbond_atom_site_label_H _geom_hbond_atom_site_label_A _geom_hbond_distance_DH _geom_hbond_distance_HA _geom_hbond_distance_DA _geom_hbond_angle_DHA _geom_hbond_site_symmetry_A O5 H1W O3 0.82 1.89 2.698(2) 170.1 2_676 O5 H2W O2 0.82 1.96 2.7677(19) 168.7 1_565 O6 H3W O1 0.82 1.94 2.7594(19) 177.5 2_667 O6 H4W O3 0.81 2.01 2.778(2) 158.7 2_676 O7 H5W O2 0.82 2.00 2.786(2) 161.3 2_667 O7 H6W O4 0.80 1.91 2.711(2) 173.1 1_556 O8 H7W O4 0.82 2.00 2.809(2) 169.2 2_776 O8 H8W O2 0.80 1.96 2.750(2) 170.1 2_767 loop_ _geom_torsion_atom_site_label_1 _geom_torsion_atom_site_label_2 _geom_torsion_atom_site_label_3 _geom_torsion_atom_site_label_4 _geom_torsion _geom_torsion_site_symmetry_1 _geom_torsion_site_symmetry_2 _geom_torsion_site_symmetry_3 _geom_torsion_site_symmetry_4 _geom_torsion_publ_flag O7 Ni1 N1 C1 -1.82(16) . . . . ? O8 Ni1 N1 C1 88.53(16) . . . . ? N2 Ni1 N1 C1 177.44(16) . . . . ? O5 Ni1 N1 C1 -179.4(3) . . . . ? O6 Ni1 N1 C1 -88.53(16) . . . . ? O7 Ni1 N1 C5 176.81(12) . . . . ? O8 Ni1 N1 C5 -92.84(13) . . . . ? N2 Ni1 N1 C5 -3.94(12) . . . . ? O5 Ni1 N1 C5 -0.8(4) . . . . ? O6 Ni1 N1 C5 90.09(13) . . . . ? O7 Ni1 N2 C6 -138(2) . . . . ? O8 Ni1 N2 C6 -78.14(16) . . . . ? O5 Ni1 N2 C6 8.75(16) . . . . ? N1 Ni1 N2 C6 -171.76(16) . . . . ? O6 Ni1 N2 C6 98.71(15) . . . . ? O7 Ni1 N2 C10 36(3) . . . . ? O8 Ni1 N2 C10 95.95(13) . . . . ? O5 Ni1 N2 C10 -177.16(13) . . . . ? N1 Ni1 N2 C10 2.33(13) . . . . ? O6 Ni1 N2 C10 -87.20(13) . . . . ? C5 N1 C1 C2 -0.1(3) . . . . ? Ni1 N1 C1 C2 178.45(13) . . . . ? N1 C1 C2 C3 -1.1(3) . . . . ? N1 C1 C2 C11 -179.73(16) . . . . ? C1 C2 C3 C4 0.8(3) . . . . ? C11 C2 C3 C4 179.40(17) . . . . ? C2 C3 C4 C5 0.7(3) . . . . ? C1 N1 C5 C4 1.6(3) . . . . ? Ni1 N1 C5 C4 -177.12(14) . . . . ? C1 N1 C5 C10 -176.40(15) . . . . ? Ni1 N1 C5 C10 4.8(2) . . . . ? C3 C4 C5 N1 -1.9(3) . . . . ? C3 C4 C5 C10 175.97(17) . . . . ? C10 N2 C6 C7 0.3(3) . . . . ? Ni1 N2 C6 C7 174.22(14) . . . . ? N2 C6 C7 C8 3.2(3) . . . . ? N2 C6 C7 C12 -176.29(17) . . . . ? C6 C7 C8 C9 -3.2(3) . . . . ? C12 C7 C8 C9 176.20(17) . . . . ? C7 C8 C9 C10 0.0(3) . . . . ? C6 N2 C10 C9 -3.7(3) . . . . ? Ni1 N2 C10 C9 -178.24(14) . . . . ? C6 N2 C10 C5 174.04(16) . . . . ? Ni1 N2 C10 C5 -0.5(2) . . . . ? C8 C9 C10 N2 3.5(3) . . . . ? C8 C9 C10 C5 -174.01(17) . . . . ? N1 C5 C10 N2 -2.9(2) . . . . ? C4 C5 C10 N2 179.05(17) . . . . ? N1 C5 C10 C9 174.76(17) . . . . ? C4 C5 C10 C9 -3.3(3) . . . . ? C3 C2 C11 O1 171.14(18) . . . . ? C1 C2 C11 O1 -10.3(3) . . . . ? C3 C2 C11 O2 -10.2(3) . . . . ? C1 C2 C11 O2 168.42(17) . . . . ? C8 C7 C12 O4 -12.5(3) . . . . ? C6 C7 C12 O4 166.93(18) . . . . ? C8 C7 C12 O3 167.88(18) . . . . ? C6 C7 C12 O3 -12.7(3) . . . . ?