#------------------------------------------------------------------------------ #$Date: 2012-02-28 14:14:52 +0200 (Tue, 28 Feb 2012) $ #$Revision: 35911 $ #$URL: file:///home/coder/svn-repositories/cod/cif/8/10/25/8102540.cif $ #------------------------------------------------------------------------------ # # This file is available in the Crystallography Open Database (COD), # http://www.crystallography.net/ # # All data on this site have been placed in the public domain by the # contributors. # data_8102540 loop_ _publ_author_name 'Huan-Huan Chen' 'Dao-Cheng Xia' 'Jian-Fang Ma' _publ_section_title ; Crystal structure of [m-11,23-dimethyl-3,7,15,19-tetraazatricyclo[19.3.1.19,13]-3,7,15,19-tetracyanomethyltetracosa-1(24),-9(25),10,12,21,23-hexaene-25,26-diolato-k8N3,N7,O25,O26:N15,N19,O25,O26]-bis[(acetato-k2O,O')cadmium(II)] hydrate, Cd2(C36H46N8O2)(CH3COO)2 · 0.8H2O ; _journal_issue 4 _journal_name_full 'Zeitschrift f\"ur Kristallographie - New Crystal Structures' _journal_page_first 713 _journal_volume 224 _journal_year 2009 _chemical_formula_moiety 'Cd2 C40 H52 N8 O6,0.8O' _chemical_formula_sum 'C40 H52 Cd2 N8 O6.8' _chemical_formula_weight 978.50 _chemical_melting_point ? _chemical_name_common ; [\m-11,23-Dimethyl-3,7,15,19-tetraazatricyclo[19.3.1.1 ^9,13^]-3,7,15,19-tetracyanomethyl tetracosa-1(24),-9(25),10,12,21,23-hexaene-25,26-diolato \k^8^N^3^,N^7^,O^25^,O^26^:N^15^,N^19^,O^25^,O^26^] -bis[(acetic-\k^2^O O')cadmium(II)] Cd2(C36H46N8O2)(CH3COO)2.0.8H2O ; _chemical_name_systematic ; [\m-11,23-Dimethyl-3,7,15,19-tetraazatricyclo[19.3.1.1 ^9,13^]-3,7,15,19-tetracyanomethyl tetracosa-1(24),-9(25),10,12,21,23-hexaene-25,26-diolato \k^8^N^3^,N^7^,O^25^,O^26^:N^15^,N^19^,O^25^,O^26^] -bis[(acetic-\k^2^O O')cadmium(II)] Cd2(C36H46N8O2)(CH3COO)2.0.8H2O ; _space_group_IT_number 148 _symmetry_cell_setting hexagonal _symmetry_space_group_name_Hall '-R 3' _symmetry_space_group_name_H-M 'R -3 :H' _atom_sites_solution_hydrogens geom _atom_sites_solution_primary direct _atom_sites_solution_secondary difmap _audit_creation_method SHELXL-97 _cell_angle_alpha 90.00 _cell_angle_beta 90.00 _cell_angle_gamma 120.00 _cell_formula_units_Z 9 _cell_length_a 31.459(13) _cell_length_b 31.459(13) _cell_length_c 12.33(3) _cell_measurement_reflns_used 5850 _cell_measurement_temperature 293(2) _cell_measurement_theta_max 29.380 _cell_measurement_theta_min 3.15 _cell_volume 10568(3) _computing_cell_refinement CrysAlis _computing_data_collection 'CrysAlis [4]' _computing_data_reduction CrysAlis _computing_structure_refinement 'SHELXL-97 (Sheldrick, 1997)' _computing_structure_solution 'SHELXS-97 [5]' _diffrn_ambient_temperature 293(2) _diffrn_detector_area_resol_mean 10.0 _diffrn_measured_fraction_theta_full 0.994 _diffrn_measured_fraction_theta_max 0.904 _diffrn_measurement_device_type 'Oxford Diffraction Gemini R Ultra' _diffrn_measurement_method '\w scan' _diffrn_radiation_monochromator graphite _diffrn_radiation_source 'fine-focus sealed tube' _diffrn_radiation_type MoK\a _diffrn_radiation_wavelength 0.71073 _diffrn_reflns_av_R_equivalents 0.0297 _diffrn_reflns_av_sigmaI/netI 0.0319 _diffrn_reflns_limit_h_max 32 _diffrn_reflns_limit_h_min -41 _diffrn_reflns_limit_k_max 42 _diffrn_reflns_limit_k_min -42 _diffrn_reflns_limit_l_max 15 _diffrn_reflns_limit_l_min -15 _diffrn_reflns_number 27271 _diffrn_reflns_theta_full 25.00 _diffrn_reflns_theta_max 29.38 _diffrn_reflns_theta_min 4.27 _exptl_absorpt_coefficient_mu 0.957 _exptl_absorpt_correction_T_max 0.850 _exptl_absorpt_correction_T_min 0.795 _exptl_absorpt_correction_type empirical _exptl_absorpt_process_details ; Oxford Diffraction: CrysAlis [4]. ; _exptl_crystal_colour colorless _exptl_crystal_density_diffrn 1.384 _exptl_crystal_density_method 'not measured' _exptl_crystal_description block _exptl_crystal_F_000 4486 _exptl_crystal_size_max 0.25 _exptl_crystal_size_mid 0.20 _exptl_crystal_size_min 0.17 _refine_diff_density_max 1.318 _refine_diff_density_min -0.751 _refine_diff_density_rms 0.106 _refine_ls_extinction_method none _refine_ls_goodness_of_fit_ref 1.073 _refine_ls_hydrogen_treatment constr _refine_ls_matrix_type full _refine_ls_number_parameters 246 _refine_ls_number_reflns 5850 _refine_ls_number_restraints 12 _refine_ls_restrained_S_all 1.072 _refine_ls_R_factor_all 0.0667 _refine_ls_R_factor_gt 0.0446 _refine_ls_shift/su_max 0.002 _refine_ls_shift/su_mean 0.000 _refine_ls_structure_factor_coef Fsqd _refine_ls_weighting_details 'calc w=1/[\s^2^(Fo^2^)+(0.0954P)^2^+0.0000P] where P=(Fo^2^+2Fc^2^)/3' _refine_ls_weighting_scheme calc _refine_ls_wR_factor_gt 0.1374 _refine_ls_wR_factor_ref 0.1480 _reflns_number_gt 4178 _reflns_number_total 5850 _reflns_threshold_expression >2sigma(I) _[local]_cod_data_source_file 1267-2752.cff _[local]_cod_data_source_block mm _[local]_cod_cif_authors_sg_H-M R-3 _[local]_cod_cif_authors_sg_Hall '-R 3 ' _[local]_cod_chemical_formula_sum_orig 'C40 H52 Cd2 N8 O6.80' _cod_depositor_comments ; The following automatic conversions were performed: '_chemical_melting_point' value 'not measured' was changed to '?' - the value is undefined or not given. Automatic conversion script Id: cif_fix_values 1569 2011-02-09 13:29:24Z adriana ; _cod_original_cell_volume 10568(26) _cod_database_code 8102540 loop_ _symmetry_equiv_pos_as_xyz 'x, y, z' '-y, x-y, z' '-x+y, -x, z' 'x+2/3, y+1/3, z+1/3' '-y+2/3, x-y+1/3, z+1/3' '-x+y+2/3, -x+1/3, z+1/3' 'x+1/3, y+2/3, z+2/3' '-y+1/3, x-y+2/3, z+2/3' '-x+y+1/3, -x+2/3, z+2/3' '-x, -y, -z' 'y, -x+y, -z' 'x-y, x, -z' '-x+2/3, -y+1/3, -z+1/3' 'y+2/3, -x+y+1/3, -z+1/3' 'x-y+2/3, x+1/3, -z+1/3' '-x+1/3, -y+2/3, -z+2/3' 'y+1/3, -x+y+2/3, -z+2/3' 'x-y+1/3, x+2/3, -z+2/3' loop_ _atom_site_label _atom_site_type_symbol _atom_site_fract_x _atom_site_fract_y _atom_site_fract_z _atom_site_U_iso_or_equiv _atom_site_adp_type _atom_site_occupancy _atom_site_symmetry_multiplicity _atom_site_calc_flag _atom_site_refinement_flags _atom_site_disorder_assembly _atom_site_disorder_group C1 C 0.5918(3) 0.2517(3) 0.5365(6) 0.112(2) Uiso 1 1 d . . . H1A H 0.5775 0.2568 0.6005 0.168 Uiso 1 1 calc R . . H1B H 0.5844 0.2656 0.4749 0.168 Uiso 1 1 calc R . . H1C H 0.6267 0.2672 0.5455 0.168 Uiso 1 1 calc R . . C2 C 0.5705(2) 0.19656(18) 0.5185(5) 0.0743(14) Uani 1 1 d . . . C3 C 0.58290(18) 0.17788(18) 0.4339(5) 0.0675(13) Uani 1 1 d . . . H3 H 0.6064 0.1996 0.3855 0.081 Uiso 1 1 calc R . . C4 C 0.56252(14) 0.12821(15) 0.4154(3) 0.0489(9) Uani 1 1 d . . . C5 C 0.52661(13) 0.09437(14) 0.4871(3) 0.0418(8) Uani 1 1 d . . . C8 C 0.57616(15) 0.11013(17) 0.3178(3) 0.0539(10) Uani 1 1 d . . . H8A H 0.5922 0.1371 0.2668 0.065 Uiso 1 1 calc R . . H8B H 0.5463 0.0851 0.2838 0.065 Uiso 1 1 calc R . . C9 C 0.62277(18) 0.07743(19) 0.2314(4) 0.0651(13) Uani 1 1 d . . . H9A H 0.6503 0.0722 0.2423 0.078 Uiso 1 1 calc R . . H9B H 0.6340 0.1059 0.1847 0.078 Uiso 1 1 calc R . . C10 C 0.58243(17) 0.03277(19) 0.1713(3) 0.0607(11) Uani 1 1 d . . . H10A H 0.5531 0.0356 0.1694 0.073 Uiso 1 1 calc R . . H10B H 0.5929 0.0337 0.0969 0.073 Uiso 1 1 calc R . . C11 C 0.56917(16) -0.01625(18) 0.2190(3) 0.0569(11) Uani 1 1 d . . . H11A H 0.5579 -0.0401 0.1606 0.068 Uiso 1 1 calc R . . H11B H 0.5988 -0.0141 0.2481 0.068 Uiso 1 1 calc R . . C19 C 0.62712(14) 0.02882(17) 0.5945(3) 0.0504(10) Uani 1 1 d . . . C12 C 0.52824(15) -0.08135(16) 0.3484(3) 0.0525(10) Uani 1 1 d . . . H12A H 0.5263 -0.1015 0.2868 0.063 Uiso 1 1 calc R . . H12B H 0.5588 -0.0722 0.3855 0.063 Uiso 1 1 calc R . . C13 C 0.65385(15) 0.12669(17) 0.3916(4) 0.0594(11) Uani 1 1 d . . . H13A H 0.6449 0.1340 0.4616 0.071 Uiso 1 1 calc R . . H13B H 0.6682 0.1565 0.3486 0.071 Uiso 1 1 calc R . . C20 C 0.66391(19) 0.0356(2) 0.6789(4) 0.0776(15) Uani 1 1 d . . . H01A H 0.6681 0.0611 0.7281 0.116 Uiso 1 1 calc R . . H01B H 0.6947 0.0446 0.6448 0.116 Uiso 1 1 calc R . . H01C H 0.6526 0.0055 0.7183 0.116 Uiso 1 1 calc R . . C14 C 0.69237(15) 0.11102(19) 0.4085(4) 0.0610(12) Uani 1 1 d . . . H14A H 0.6758 0.0759 0.4218 0.073 Uiso 1 1 calc R . . H14B H 0.7117 0.1176 0.3428 0.073 Uiso 1 1 calc R . . C15 C 0.72449(18) 0.1362(2) 0.4976(4) 0.0765(15) Uani 1 1 d . . . C16 C 0.48378(14) -0.04354(18) 0.2667(3) 0.0512(10) Uani 1 1 d . . . H16A H 0.4874 -0.0122 0.2460 0.061 Uiso 1 1 calc R . . H16B H 0.4606 -0.0563 0.3262 0.061 Uiso 1 1 calc R . . C17 C 0.4624(2) -0.0787(2) 0.1708(5) 0.0890(17) Uiso 1 1 d . . . H17A H 0.4869 -0.0688 0.1140 0.107 Uiso 1 1 calc R . . H17B H 0.4534 -0.1116 0.1937 0.107 Uiso 1 1 calc R . . C18 C 0.4199(3) -0.0783(3) 0.1298(6) 0.106(2) Uiso 1 1 d . . . N1 N 0.60933(11) 0.08912(13) 0.3372(3) 0.0479(8) Uani 1 1 d . . . N2 N 0.53145(11) -0.03538(13) 0.3053(2) 0.0429(7) Uani 1 1 d . . . N3 N 0.7497(2) 0.1567(2) 0.5681(5) 0.1073(17) Uiso 1 1 d . . . N4 N 0.3873(3) -0.0725(3) 0.1003(7) 0.154(3) Uiso 1 1 d . . . O1 O 0.50646(9) 0.04667(9) 0.4673(2) 0.0403(6) Uani 1 1 d . . . O2 O 0.60829(11) 0.05622(12) 0.5978(2) 0.0606(8) Uani 1 1 d . . . O3 O 0.61623(11) -0.00218(11) 0.5225(2) 0.0570(7) Uani 1 1 d . . . Cd01 Cd 0.558896(9) 0.018495(10) 0.449300(19) 0.03765(12) Uani 1 1 d . . . C6 C 0.51275(15) 0.11263(15) 0.5765(3) 0.0482(9) Uani 1 1 d . . . C7 C 0.53524(19) 0.16327(18) 0.5901(4) 0.0655(12) Uani 1 1 d . . . H7 H 0.5264 0.1754 0.6495 0.079 Uiso 1 1 calc R . . O1W O 0.5117(12) 0.3405(13) 0.699(3) 0.180(10) Uani 0.25 1 d PU . . O2W O 0.5708(16) 0.3461(16) 0.815(4) 0.151(13) Uani 0.15 1 d PU . . loop_ _atom_site_aniso_label _atom_site_aniso_U_11 _atom_site_aniso_U_22 _atom_site_aniso_U_33 _atom_site_aniso_U_23 _atom_site_aniso_U_13 _atom_site_aniso_U_12 C2 0.072(3) 0.048(3) 0.100(4) -0.005(3) -0.005(3) 0.027(2) C3 0.060(3) 0.056(3) 0.085(4) 0.015(2) 0.004(2) 0.027(2) C4 0.042(2) 0.051(2) 0.058(2) 0.0080(18) -0.0023(17) 0.0260(18) C5 0.0369(18) 0.048(2) 0.045(2) 0.0013(16) -0.0059(15) 0.0249(17) C8 0.049(2) 0.068(3) 0.048(2) 0.021(2) 0.0070(18) 0.032(2) C9 0.062(3) 0.082(3) 0.056(3) 0.023(2) 0.026(2) 0.040(3) C10 0.060(3) 0.095(3) 0.035(2) 0.009(2) 0.0158(19) 0.045(3) C11 0.052(2) 0.086(3) 0.042(2) -0.006(2) 0.0093(18) 0.041(2) C19 0.0351(19) 0.060(3) 0.044(2) 0.0090(19) -0.0019(16) 0.0145(18) C12 0.056(2) 0.067(3) 0.048(2) -0.0154(19) -0.0009(18) 0.041(2) C13 0.038(2) 0.058(3) 0.070(3) 0.014(2) 0.0033(19) 0.0151(19) C20 0.064(3) 0.076(3) 0.075(3) 0.008(3) -0.028(3) 0.022(3) C14 0.038(2) 0.068(3) 0.071(3) 0.016(2) 0.012(2) 0.022(2) C15 0.048(3) 0.091(4) 0.071(3) 0.012(3) -0.001(2) 0.021(3) C16 0.042(2) 0.082(3) 0.0360(19) -0.0072(19) -0.0033(16) 0.036(2) N1 0.0371(16) 0.060(2) 0.0449(17) 0.0121(15) 0.0064(13) 0.0234(15) N2 0.0394(16) 0.066(2) 0.0321(15) -0.0036(14) 0.0005(12) 0.0329(16) O1 0.0369(13) 0.0440(14) 0.0414(13) -0.0018(11) 0.0031(10) 0.0212(11) O2 0.0534(17) 0.081(2) 0.0517(17) -0.0124(15) -0.0083(13) 0.0371(17) O3 0.0564(17) 0.0612(18) 0.0542(17) -0.0050(14) -0.0101(14) 0.0300(15) Cd01 0.03127(16) 0.04944(19) 0.03257(17) -0.00015(10) 0.00082(9) 0.02041(12) C6 0.047(2) 0.054(2) 0.053(2) -0.0067(18) -0.0063(17) 0.0319(19) C7 0.069(3) 0.061(3) 0.077(3) -0.015(2) -0.011(3) 0.040(3) O1W 0.180(10) 0.180(10) 0.180(10) -0.0001(10) -0.0002(10) 0.090(5) O2W 0.151(13) 0.151(13) 0.151(13) 0.0001(10) 0.0001(10) 0.075(6) loop_ _atom_type_symbol _atom_type_description _atom_type_scat_dispersion_real _atom_type_scat_dispersion_imag _atom_type_scat_source C C 0.0033 0.0016 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' H H 0.0000 0.0000 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' N N 0.0061 0.0033 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' O O 0.0106 0.0060 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' Cd Cd -0.8075 1.2024 'International Tables Vol C Tables 4.2.6.8 and 6.1.1.4' loop_ _geom_angle_atom_site_label_1 _geom_angle_atom_site_label_2 _geom_angle_atom_site_label_3 _geom_angle _geom_angle_site_symmetry_1 _geom_angle_site_symmetry_3 _geom_angle_publ_flag C3 C2 C7 117.2(5) . . ? C3 C2 C1 123.3(5) . . ? C7 C2 C1 119.5(5) . . ? C2 C3 C4 123.4(5) . . ? C3 C4 C5 119.7(4) . . ? C3 C4 C8 120.6(4) . . ? C5 C4 C8 119.7(4) . . ? O1 C5 C6 122.3(3) . . ? O1 C5 C4 119.2(3) . . ? C6 C5 C4 118.5(4) . . ? C4 C8 N1 115.9(3) . . ? N1 C9 C10 116.6(4) . . ? C11 C10 C9 115.4(4) . . ? N2 C11 C10 117.0(3) . . ? O3 C19 O2 121.4(4) . . ? O3 C19 C20 120.3(5) . . ? O2 C19 C20 118.3(4) . . ? O3 C19 Cd01 62.4(2) . . ? O2 C19 Cd01 59.1(2) . . ? C20 C19 Cd01 177.1(4) . . ? C6 C12 N2 118.5(3) 10_656 . ? N1 C13 C14 113.1(4) . . ? C15 C14 C13 112.2(5) . . ? N3 C15 C14 178.9(7) . . ? N2 C16 C17 114.8(4) . . ? C18 C17 C16 110.0(5) . . ? N4 C18 C17 172.3(9) . . ? C13 N1 C9 109.2(3) . . ? C13 N1 C8 108.1(3) . . ? C9 N1 C8 108.5(3) . . ? C13 N1 Cd01 113.8(3) . . ? C9 N1 Cd01 114.5(3) . . ? C8 N1 Cd01 102.3(2) . . ? C16 N2 C11 112.3(3) . . ? C16 N2 C12 112.1(3) . . ? C11 N2 C12 107.5(3) . . ? C16 N2 Cd01 110.7(2) . . ? C11 N2 Cd01 109.0(3) . . ? C12 N2 Cd01 104.9(2) . . ? C5 O1 Cd01 115.8(2) . . ? C5 O1 Cd01 129.5(2) . 10_656 ? Cd01 O1 Cd01 101.47(10) . 10_656 ? C19 O2 Cd01 92.8(2) . . ? C19 O3 Cd01 90.3(3) . . ? O1 Cd01 O1 78.53(10) . 10_656 ? O1 Cd01 N2 106.76(10) . . ? O1 Cd01 N2 81.32(16) 10_656 . ? O1 Cd01 O2 99.06(11) . . ? O1 Cd01 O2 100.15(17) 10_656 . ? N2 Cd01 O2 153.85(12) . . ? O1 Cd01 O3 151.53(12) . . ? O1 Cd01 O3 92.80(11) 10_656 . ? N2 Cd01 O3 98.50(13) . . ? O2 Cd01 O3 55.42(11) . . ? O1 Cd01 N1 88.15(10) . . ? O1 Cd01 N1 163.79(10) 10_656 . ? N2 Cd01 N1 93.91(19) . . ? O2 Cd01 N1 90.97(18) . . ? O3 Cd01 N1 103.25(12) . . ? O1 Cd01 C19 126.01(14) . . ? O1 Cd01 C19 96.57(15) 10_656 . ? N2 Cd01 C19 125.82(15) . . ? O2 Cd01 C19 28.11(13) . . ? O3 Cd01 C19 27.32(12) . . ? N1 Cd01 C19 98.75(16) . . ? C7 C6 C5 118.5(4) . . ? C7 C6 C12 117.2(4) . 10_656 ? C5 C6 C12 124.0(4) . 10_656 ? C6 C7 C2 122.8(5) . . ? loop_ _geom_bond_atom_site_label_1 _geom_bond_atom_site_label_2 _geom_bond_distance _geom_bond_site_symmetry_2 _geom_bond_publ_flag C1 C2 1.531(9) . ? C2 C3 1.348(8) . ? C2 C7 1.394(8) . ? C3 C4 1.379(6) . ? C4 C5 1.410(6) . ? C4 C8 1.483(7) . ? C5 O1 1.327(5) . ? C5 C6 1.408(6) . ? C8 N1 1.508(5) . ? C9 N1 1.474(6) . ? C9 C10 1.533(7) . ? C10 C11 1.502(7) . ? C11 N2 1.479(5) . ? C19 O3 1.233(5) . ? C19 O2 1.267(5) . ? C19 C20 1.490(6) . ? C19 Cd01 2.687(5) . ? C12 C6 1.490(6) 10_656 ? C12 N2 1.496(5) . ? C13 N1 1.467(6) . ? C13 C14 1.534(6) . ? C14 C15 1.434(8) . ? C15 N3 1.135(8) . ? C16 N2 1.469(5) . ? C16 C17 1.525(8) . ? C17 C18 1.435(10) . ? C18 N4 1.186(10) . ? N1 Cd01 2.416(4) . ? N2 Cd01 2.303(5) . ? O1 Cd01 2.240(2) . ? O1 Cd01 2.296(3) 10_656 ? O2 Cd01 2.309(5) . ? O3 Cd01 2.380(3) . ? Cd01 O1 2.296(3) 10_656 ? C6 C7 1.393(6) . ? C6 C12 1.490(6) 10_656 ?